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Joaquin J. Garcia, M.D.

  1. Pathologist
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Publications

  1. Nakkireddy SR, Jang I, Kim M, Yin LX, Rivera M, Garcia JJ, Bartemes KR, Routman DM, Moore EJ, Abdel-Halim CN, Ma DJ, Van Abel KM, Hwang TH. Integrative analysis of H&E and IHC identifies prognostic immune subtypes in HPV related oropharyngeal cancer. Commun Med (Lond). 2024 Oct 3; 4 (1):190 Epub 2024 Oct 03
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  2. Chan SA, Benson JC, Neben Wittich MA, Chatzopoulos K, Garcia JJ, Geiersbach KB, Gruber LM, Wermers RA, Pignolo RJ, Rose PS, Van Abel KM. Soft tissue aneurysmal bone cyst presenting as an enlarging neck mass: Case report and review of the head and neck literature. Neuroradiol J. 2024 Aug 6; 19714009241269441 Epub 2024 Aug 06
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  3. Tekin B, Cubilla AL, Cheville JC, Smith CY, Jenkins SM, Dasari S, Enninga EAL, Norgan AP, Menon S, Whaley RD, Hernandez LH, Jimenez RE, Garcia JJ, Thompson RH, Leibovich BC, Karnes RJ, Boorjian SA, Pagliaro LC, Erickson LA, Guo R, Gupta S. High-risk human papilloma virus status & outcomes for penile squamous cell carcinoma: A single institution experience. Hum Pathol. 2024 Aug; 150:9-19 Epub 2024 June 21
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  4. Tekin B, Sali AP, Menon S, Cheville JC, Smith CY, Jenkins SM, Dasari S, Enninga EAL, Norgan AP, Cubilla AL, Whaley RD, Hernandez LH, Jimenez RE, Garcia JJ, Thompson RH, Leibovich BC, Karnes RJ, Boorjian SA, Pagliaro LC, Erickson LA, Guo R, Gupta S. Comparison of a modified staging system with 8th edition AJCC criteria in a North American cohort of pT2/pT3 HPV-negative penile squamous cell carcinoma. Hum Pathol. 2024 Jun; 148:81-86 Epub 2024 May 22
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  5. Flotte TJ, Derauf SA, Byrd RK, Kroneman TN, Bell DA, Stetzik L, Lee SY, Samiei A, Hart SN, Garcia JJ, Beamer G, Westerling-Bui T. Democratizing Artificial Intelligence in Anatomic Pathology. Arch Pathol Lab Med. 2024 Apr 23 [Epub ahead of print]
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  6. Nejat P, Alsaafin A, Alabtah G, Comfere NI, Mangold AR, Murphree DH, Zot P, Yasir S, Garcia JJ, Tizhoosh HR. Creating an atlas of normal tissue for pruning WSI patching through anomaly detection. Sci Rep. 2024 Feb 16; 14 (1):3932
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  7. Shamir ER, Bean GR, Schwartz CJ, Vohra P, Wang A, Allard GM, Wolsky RJ, Garcia JJ, Chen YY, Krings G. Solid-Basaloid Adenoid Cystic Carcinoma of the Breast: An Aggressive Subtype Enriched for Notch Pathway and Chromatin Modifier Mutations With MYB Overexpression. Mod Pathol. 2023 Dec; 36 (12):100324 Epub 2023 Sept 03
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  8. Palsgrove DN, Foss RD, Yu W, Garcia J, Rooper LM, Rekhtman N, Antonescu C, Gagan J, Agaimy A, Bishop JA. Adamantinoma-like Ewing Sarcoma (ALES) May Harbor FUS Rearrangements : A Potential Diagnostic Pitfall. Am J Surg Pathol. 2023 Nov 1; 47 (11):1243-1251 Epub 2023 July 27
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  9. Bartemes KR, Gochanour BR, Routman DM, Ma DJ, Doering KA, Burger KN, Foote PH, Taylor WR, Mahoney DW, Berger CK, Cao X, Then SS, Haller TJ, Larish AM, Moore EJ, Garcia JJ, Graham RP, Bakkum-Gamez JN, Kisiel JB, Van Abel KM. Assessing the capacity of methylated DNA markers of cervical squamous cell carcinoma to discriminate oropharyngeal squamous cell carcinoma in human papillomavirus mediated disease. Oral Oncol. 2023 Nov; 146:106568 Epub 2023 Sept 16
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  10. Yin LX, Rivera M, Garcia JJ, Bartemes KR, Lewis DB, Lohse CM, Routman DM, Ma DJ, Moore EJ, Van Abel KM. Impact of Tumor-Infiltrating Lymphocytes on Disease Progression in Human Papillomavirus-Related Oropharyngeal Carcinoma. Otolaryngol Head Neck Surg. 2023 Sep; 169 (3):539-547 Epub 2023 Jan 30
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  11. Laughlin BS, Ebrahimi S, Voss MM, Patel SH, Foote RL, McGee LA, Garcia J, Ma DJ, Garces YI, Wittich MAN, Price KA, Schmitt A, Zhai Q, May BC, Nagel TH, Hinni ML, Chintakuntlawar AV, DeWees TA, Rwigema JM. Clinicopathologic Factors and Their Association with Outcomes of Salivary Duct Carcinoma: A Multicenter Experience. Adv Radiat Oncol. 2023 Jul-Aug; 8 (4):101204 Epub 2023 Mar 01
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  12. Kann BH, Likitlersuang J, Bontempi D, Ye Z, Aneja S, Bakst R, Kelly HR, Juliano AF, Payabvash S, Guenette JP, Uppaluri R, Margalit DN, Schoenfeld JD, Tishler RB, Haddad R, Aerts HJWL, Garcia JJ, Flamand Y, Subramaniam RM, Burtness BA, Ferris RL. Screening for extranodal extension in HPV-associated oropharyngeal carcinoma: evaluation of a CT-based deep learning algorithm in patient data from a multicentre, randomised de-escalation trial. Lancet Digit Health. 2023 Jun; 5 (6):e360-e369 Epub 2023 Apr 21
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  13. Haller TJ, Yin XL, O'Byrne TJ, Moore EJ, Ma DJ, Price KP, Patel SH, Hinni ML, Neben-Wittich MA, McGee LA, Price DL, Janus JR, Kasperbauer JK, Nagel TH, Routman DM, Lester SC, Rwigema JCM, Chintakuntlawar AV, Savvides PS, Garcia JJ, Foote RL, Van Abel KM. 30-day morbidity and mortality after transoral robotic surgery for human papillomavirus (HPV) associated oropharyngeal squamous cell carcinoma: A retrospective analysis of two prospective adjuvant de-escalation trials (MC1273 & MC1675). Oral Oncol. 2023 Feb; 137:106248 Epub 2023 Jan 03
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  14. Afshari M, Yasir S, Keeney GL, Jimenez RE, Garcia JJ, Tizhoosh HR. Single patch super-resolution of histopathology whole slide images: a comparative study. J Med Imaging (Bellingham). 2023 Jan; 10 (1):017501 Epub 2023 Jan 31
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  15. Musheer Aalam SM, Viringipurampeer IA, Walb MC, Tryggestad EJ, Emperumal CP, Song J, Xu X, Saini R, Lombaert IMA, Sarkaria JN, Garcia J, Janus JR, Kannan N. Characterization of Transgenic NSG-SGM3 Mouse Model of Precision Radiation-Induced Chronic Hyposalivation. Radiat Res. 2022 Sep 1; 198 (3):243-254
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  16. Routman DM, Kumar S, Chera BS, Jethwa KR, Van Abel KM, Frechette K, DeWees T, Golafshar M, Garcia JJ, Price DL, Kasperbauer JL, Patel SH, Neben-Wittich MA, Laack NL, Chintakuntlawar AV, Price KA, Liu MC, Foote RL, Moore EJ, Gupta GP, Ma DJ. Detectable Postoperative Circulating Tumor Human Papillomavirus DNA and Association with Recurrence in Patients With HPV-Associated Oropharyngeal Squamous Cell Carcinoma. Int J Radiat Oncol Biol Phys. 2022 Jul 1; 113 (3):530-538 Epub 2022 Feb 12
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  17. Kowalchuk RO, Van Abel KM, Sauer AB, Yin LX, Garcia JJ, Harmsen WS, Moore EJ, Price DL, Chintakuntlawar AV, Price KR, Lester SC, Wittich MN, Patel SH, Foote RL, Ma DM, Nagelschneider AA, Routman DM. The Number of Radiographically Positive Lymph Nodes Further Stratifies Patient Survival Among Clinical N1 Patients With Human Papillomavirus-Associated Oropharyngeal Cancer. Adv Radiat Oncol. 2022 Jul-Aug; 7 (4):100926 Epub 2022 Feb 23
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  18. Majumdar R, Vrana JA, Koepplin JW, Milosevic D, Roden AC, Garcia JJ, Kipp BR, Moyer AM. SARS-CoV-2 RNA detection in Formalin-Fixed Paraffin-Embedded (FFPE) tissue by droplet digital PCR (ddPCR). Clin Chim Acta. 2022 Jul 01; 532:181-187. Epub 2022 May 10.
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  19. Ida CM, Pulido J, Greipp PT, Garcia JJ, Olsen TW, Dalvin L, Salomao DR. BAP1 Immunostain Status in Intraocular Biopsy Specimens for Uveal Melanoma Highly Correlates with Other Prognostic Markers. Ocul Oncol Pathol. 2022 Feb; 8 (1):22-29 Epub 2021 Nov 15
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  20. Ferris RL, Flamand Y, Weinstein GS, Li S, Quon H, Mehra R, Garcia JJ, Chung CH, Gillison ML, Duvvuri U, O'Malley BW Jr, Ozer E, Thomas GR, Koch WM, Gross ND, Bell RB, Saba NF, Lango M, Mendez E, Burtness B. Phase II Randomized Trial of Transoral Surgery and Low-Dose Intensity Modulated Radiation Therapy in Resectable p16+ Locally Advanced Oropharynx Cancer: An ECOG-ACRIN Cancer Research Group Trial (E3311). J Clin Oncol. 2022 Jan 10; 40 (2):138-149 Epub 2021 Oct 26
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  21. Karp EE, Garcia JJ, Chan SA, Van Abel KM, Moore EJ, Janus JR, Kasperbauer JL, Olsen KD, Hinni ML, Price KA, Ma DJ, Foote RL, Neben Wittich MA, Price DL. The role of total parotidectomy in high-grade parotid malignancy: A multisurgeon retrospective review. Am J Otolaryngol. 2022 Jan-Feb; 43(1):103194. Epub 2021 Sep 02.
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  22. Kowalchuk RO, Van Abel KM, Yin LX, Garcia J, Harmsen WS, Moore EJ, Price DL, Chintakuntlawar AV, Price KR, Lester SC, Neben Wittich M, Patel SH, Foote RL, Ma DM, Nagelschneider AA, Routman DM. Correlation between radiographic and pathologic lymph node involvement and extranodal extension via CT and PET in HPV-associated oropharyngeal cancer. Oral Oncol. 2021 Dec; 123:105625 Epub 2021 Nov 20
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  23. Ma DJ, Price K, Eric MJ, Patel SH, Hinni ML, Ginos BF, Fruth B, Foster NR, Chintakuntlawar AV, Neben-Wittich MA, Garces Y, Van Abel K, Price DL, Kasperbauer JL, Janus JR, Nagel TH, Garcia JJ, Foote RL. Long-Term Results for MC1273, A Phase II Evaluation of De-Escalated Adjuvant Radiation Therapy for Human Papillomavirus Associated Oropharyngeal Squamous Cell Carcinoma (HPV+ OPSCC). Int J Radiat Oncol Biol Phys. 2021 Nov 1; 111 (3S):S61
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  24. Cloutier JM, Kunder CA, Charville GW, Hosfield EM, Garcia JJ, Brown RA, Troxell ML, Allison KH, Bean GR. Nodular fasciitis of the breast: clinicopathologic and molecular characterization with identification of novel USP6 fusion partners. Mod Pathol. 2021 Oct; 34 (10):1865-1875 Epub 2021 June 07
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  25. Chan SA, Van Abel KM, Lewis JE, Routman DM, Garcia JJ, Karp EE, Price DL, Janus JR, Kasperbauer JL, Moore EJ. Mucoepidermoid carcinoma of the parotid gland: Twenty-year experience in treatment and outcomes. Head Neck. 2021 Sep; 43(9):2663-2671. Epub 2021 May 01.
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  26. Roden AC, Vrana JA, Koepplin JW, Hudson AE, Norgan AP, Jenkinson G, Yamaoka S, Ebihara H, Monroe R, Szabolcs MJ, Majumdar R, Moyer AM, Garcia JJ, Kipp BR. Comparison of In Situ Hybridization, Immunohistochemistry, and Reverse Transcription-Droplet Digital Polymerase Chain Reaction for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Testing in Tissue. Arch Pathol Lab Med. 2021 Jul 1; 145 (7):785-796
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  27. Riaz N, Sherman E, Pei X, Schoder H, Grkovski M, Paudyal R, Katabi N, Selenica P, Yamaguchi TN, Ma D, Lee SK, Shah R, Kumar R, Kuo F, Ratnakumar A, Aleynick N, Brown D, Zhang Z, Hatzoglou V, Liu LY, Salcedo A, Tsai CJ, McBride S, Morris LGT, Boyle J, Singh B, Higginson DS, Damerla RR, Paula ADC, Price K, Moore EJ, Garcia JJ, Foote R, Ho A, Wong RJ, Chan TA, Powell SN, Boutros PC, Humm JL, Shukla-Dave A, Pfister D, Reis-Filho JS, Lee N. Precision Radiotherapy: Reduction in Radiation for Oropharyngeal Cancer in the 30 ROC Trial. J Natl Cancer Inst. 2021 Jun 1; 113 (6):742-751
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  28. Waddle MR, Ma DJ, Visscher SL, Borah BJ, May JM, Price KA, Moore EJ, Patel SH, Hinni ML, Chintakuntlawar AV, Garcia JJ, Graner DE, Neben-Wittich MA, Garces YI, Hallemeier CL, Price DL, Kasperbauer JL, Janus JR, Foote RL, Miller RC. Costs of Definitive Chemoradiation, Surgery, and Adjuvant Radiation Versus De-Escalated Adjuvant Radiation per MC1273 in HPV+ Cancer of the Oropharynx. Int J Radiat Oncol Biol Phys. 2021 Jun 1; 110 (2):396-402 Epub 2020 Dec 23
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  29. Chatzopoulos K, Sotiriou S, Collins AR, Kartsidis P, Schmitt AC, Chen X, Khazaie K, Hinni ML, Ramsower CA, Zarka MA, Patel SH, Garcia JJ. Transcriptomic and Immunophenotypic Characterization of Tumor Immune Microenvironment in Squamous Cell Carcinoma of the Oral Tongue. Head Neck Pathol. 2021 Jun; 15 (2):509-522 Epub 2020 Oct 03
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  30. Moore EJ, Van Abel KM, Routman DM, Lohse CM, Price KAR, Neben-Wittich M, Chintakuntlawar AV, Price DL, Kasperbauer JL, Garcia JJ, Hinni ML, Patel SH, Janus JR, Foote RL, Ma DJ. Human papillomavirus oropharynx carcinoma: Aggressive de-escalation of adjuvant therapy. Head Neck. 2021 Jan; 43 (1):229-237 Epub 2020 Sept 23
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  31. Burlile J, Collins A, Garcia J, Gendron K, Cunningham D, Foote R. A case of metachronous bilateral secretory carcinoma. Rare Tumors. 2021; 13:20363613211009144 Epub 2021 Apr 09
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  32. Chatzopoulos K, Collins AR, Sotiriou S, Keeney MG, Visscher DW, Rivera M, Schembri-Wismayer DJ, Lewis JE, Greipp PT, Sukov WR, Chintakuntlawar AV, Price KA, Garcia JJ. Increased ERBB2 Gene Copy Numbers Reveal a Subset of Salivary Duct Carcinomas with High Densities of Tumor Infiltrating Lymphocytes and PD-L1 Expression. Head Neck Pathol. 2020 Dec; 14 (4):951-965 Epub 2020 Apr 29
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  33. Van Abel KM, Routman DM, Moore EJ, Ma DJ, Yin LX, Fields PA, Schofield M, Bartemes KR, Chatzopoulos K, Price DL, Janus JR, Kasperbauer JL, Price KA, Chintakuntlawar AV, Neben-Wittich MA, Foote RL, Garcia JJ. T cell fraction impacts oncologic outcomes in human papillomavirus associated oropharyngeal squamous cell carcinoma. Oral Oncol. 2020 Dec; 111:104894 Epub 2020 July 23
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  34. Ferris RL, Flamand Y, Holsinger FC, Weinstein GS, Quon H, Mehra R, Garcia JJ, Hinni ML, Gross ND, Sturgis EM, Duvvuri U, Mendez E, Ridge JA, Magnuson JS, Higgins KA, Patel MR, Smith RB, Karakla DW, Kupferman ME, Malone JP, Judson BL, Richmon J, Boyle JO, Bayon R, O'Malley BW Jr, Ozer E, Thomas GR, Koch WM, Bell RB, Saba NF, Li S, Sigurdson ER, Burtness B. A novel surgeon credentialing and quality assurance process using transoral surgery for oropharyngeal cancer in ECOG-ACRIN Cancer Research Group Trial E3311. Oral Oncol. 2020 Nov; 110:104797 Epub 2020 July 14
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  35. Marinelli LM, Chatzopoulos K, Marinelli JP, Chen TY, Collins AR, Sotiriou S, Raslan SW, Vencio EF, Price DL, Garcia JJ, Janus JR. Clinicopathologic predictors of survival in buccal squamous cell carcinoma. J Oral Pathol Med. 2020 Oct; 49 (9):857-864 Epub 2020 June 18
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  36. Gutierrez CN, Chatzopoulos K, Garcia JJ, Janus JR. Review of treatment modalities and outcomes of patients with basal cell adenocarcinoma. Am J Otolaryngol. 2020 May - Jun; 41 (3):102414 Epub 2020 Feb 06
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  37. Albadri ST, Pulido JS, Macon WR, Garcia JJ, Salomao DR. HISTOLOGIC FINDINGS IN VITREORETINAL LYMPHOMA: Learning From Enucleation Specimens. Retina. 2020 Feb; 40 (2):391-398
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  38. Chatzopoulos K, Gutierrez CN, Garcia JJ, Stokken JK, Choby G, O'Brien EK. Sinonasal mucosal vasculature in yellow nail syndrome and chronic rhinosinusitis with or without polyps. Int Forum Allergy Rhinol. 2020 Jan; 10 (1):128-132 Epub 2019 Oct 07
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  39. Ma DJ, Price KA, Moore EJ, Patel SH, Hinni ML, Garcia JJ, Graner DE, Neben-Wittich M, Garces YI, Chintakuntlawar AV, Price DL, Van Abel KM, Kasperbauer JL, Janus JR, Waddle M, Miller RC, Shiraishi S, Mutter RW, Corbin KS, Park SS, Foote RL. Reply to A.S. Garden. J Clin Oncol 2019 Dec 20; 37 (36):3559-3560 Epub 2019 Sept 26
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  40. Albadri ST, Pulido JS, Macon WR, Garcia JJ, Salomao DR. HISTOLOGIC FINDINGS IN VITREORETINAL LYMPHOMA: Learning From Enucleation Specimens. Retina. 2019 Oct 14 [Epub ahead of print]
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  41. Ma DJ, Price KA, Moore EJ, Patel SH, Hinni ML, Garcia JJ, Graner DE, Foster NR, Ginos B, Neben-Wittich M, Garces YI, Chintakuntlawar AV, Price DL, Olsen KD, Van Abel KM, Kasperbauer JL, Janus JR, Waddle M, Miller R, Shiraishi S, Foote RL. Phase II Evaluation of Aggressive Dose De-Escalation for Adjuvant Chemoradiotherapy in Human Papillomavirus-Associated Oropharynx Squamous Cell Carcinoma. J Clin Oncol. 2019 Aug 1; 37 (22):1909-1918 Epub 2019 June 04
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  42. Anzalone CL, Nagelschneider AA, Sims JR, Garcia JJ, DeLone DR, Price DL. Oncocytoma Presenting as a Fat-Containing Intraparotid Mass. Ear Nose Throat J. 2019 Aug; 98 (7):403-404 Epub 2019 Apr 08
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  43. Miller KC, Marinelli JP, Van Gompel JJ, Link MJ, Janus JR, Foote RL, Price KA, Garcia J, Rivera M, Chintakuntlawar AV. Utility of adjuvant chemotherapy in patients receiving surgery and adjuvant radiotherapy for primary treatment of esthesioneuroblastoma. Head Neck. 2019 May; 41 (5):1335-1341 Epub 2018 Dec 10
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  44. Bean GR, Krings G, Otis CN, Solomon DA, Garcia JJ, van Zante A, Camelo-Piragua S, van Ziffle J, Chen YY. CRTC1-MAML2 fusion in mucoepidermoid carcinoma of the breast. Histopathology. 2019 Feb; 74 (3):463-473 Epub 2018 Dec 05
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  45. Viscuse PV, Price KA, Garcia JJ, Schembri-Wismayer DJ, Chintakuntlawar AV. First Line Androgen Deprivation Therapy vs. Chemotherapy for Patients With Androgen Receptor Positive Recurrent or Metastatic Salivary Gland Carcinoma-A Retrospective Study. Front Oncol. 2019; 9:701 Epub 2019 Aug 02
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  46. Olson MD, Van Abel KM, Wehrs RN, Garcia JJ, Moore EJ. Ewing sarcoma of the head and neck: The Mayo Clinic experience. Head Neck. 2018 Sep; 40(9):1999-2006. Epub 2018 May 13.
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  47. Pasalic D, Funk RK, Garcia JJ, Price DL, Price KA, Harmsen WS, Patel SH, Young GD, Foote RL, Moore EJ, Ma DJ. Magnitude of benefit for adjuvant radiotherapy following minimally invasive surgery in intermediate to high risk HPV-positive oropharyngeal squamous cell carcinoma. Oral Oncol. 2018 Jul; 82:181-186 Epub 2018 June 06
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  48. Oldenburg MS, Ekbom DC, San Marina S, Voss S, Chen T, Garcia J, Janus JR. Preliminary results of tissue-engineered injection laryngoplasty material in a rabbit model. Laryngoscope. 2018 Jan; 128 (1):160-167 Epub 2017 Sept 12
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  49. Bishop JA, Andreasen S, Hang JF, Bullock MJ, Chen TY, Franchi A, Garcia JJ, Gnepp DR, Gomez-Fernandez CR, Ihrler S, Kuo YJ, Lewis JS Jr, Magliocca KR, Pambuccian S, Sandison A, Uro-Coste E, Stelow E, Kiss K, Westra WH. HPV-related Multiphenotypic Sinonasal Carcinoma: An Expanded Series of 49 Cases of the Tumor Formerly Known as HPV-related Carcinoma With Adenoid Cystic Carcinoma-like Features. Am J Surg Pathol. 2017 Dec; 41 (12):1690-1701
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  50. Routman DM, Funk RK, Tangsriwong K, Lin A, Keeney MG, Garcia JJ, Zarka MA, Lewis JT, Stoddard DG, Moore EJ, Day CN, Zhai Q, Price KA, Lukens JN, Swisher-McClure S, Weinstein GS, O'Malley BW Jr, Foote RL, Ma DJ. Relapse Rates With Surgery Alone in Human Papillomavirus-Related Intermediate- and High-Risk Group Oropharynx Squamous Cell Cancer: A Multi-Institutional Review. Int J Radiat Oncol Biol Phys. 2017 Nov 15; 99 (4):938-946 Epub 2017 June 28
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  51. Sajed DP, Faquin WC, Carey C, Severson EA, H Afrogheh A, A Johnson C, Blacklow SC, Chau NG, Lin DT, Krane JF, Jo VY, Garcia JJ, Sholl LM, Aster JC. Diffuse Staining for Activated NOTCH1 Correlates With NOTCH1 Mutation Status and Is Associated With Worse Outcome in Adenoid Cystic Carcinoma. Am J Surg Pathol. 2017 Nov; 41 (11):1473-1482
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  52. Alsidawi S, Price KA, Chintakuntlawar AV, Westin GF, Garcia JJ, Ma DJ, Okuno SH. Characteristics and long-term outcomes of head and neck squamous cell carcinoma after solid organ transplantation. Oral Oncol. 2017 Sep; 72:104-109 Epub 2017 July 17
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  53. Dickerson JA, Fletcher AH, Procop G, Keren DF, Singh IR, Garcia JJ, Carpenter RB, Miles J, Jackson B, Astion ML. Transforming Laboratory Utilization Review into Laboratory Stewardship: Guidelines by the PLUGS National Committee for Laboratory Stewardship. J Appl Lab Med. 2017 Sep 1; 2 (2):259-268
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  54. Fossum CC, Chintakuntlawar AV, Price DL, Garcia JJ. Characterization of the oropharynx: anatomy, histology, immunology, squamous cell carcinoma and surgical resection. Histopathology. 2017 Jun; 70 (7):1021-1029 Epub 2017 Jan 24
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  55. Oldenburg MS, Janus J, Voss S, San Marina S, Chen T, Garcia J, Ekbom D. Histologic Evaluation of Micronized AlloDerm After Injection Laryngoplasty in a Rabbit Model. Laryngoscope. 2017 May; 127 (5):E166-E169 Epub 2016 Aug 31
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  56. Chen TY, Keeney MG, Chintakuntlawar AV, Knutson DL, Kloft-Nelson S, Greipp PT, Garrity JA, Salomao DR, Garcia JJ. Adenoid cystic carcinoma of the lacrimal gland is frequently characterized by MYB rearrangement. Eye (Lond). 2017 May; 31(5):720-725. Epub 2017 Jan 13.
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  57. Janus JR, Jackson RS, Lees KA, Voss SG, Wilson ZC, Remmes NB, Keeney MG, Garcia JJ, San Marina S. Human Adipose-Derived Mesenchymal Stem Cells for Osseous Rehabilitation of Induced Osteoradionecrosis: A Rodent Model. Otolaryngol Head Neck Surg. 2017 Apr; 156 (4):616-621 Epub 2017 Jan 24
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  58. Wilson TJ, Hebert-Blouin MN, Murthy NS, Garcia JJ, Amrami KK, Spinner RJ. The nearly invisible intraneural cyst: a new and emerging part of the spectrum. Neurosurg Focus. 2017 Mar; 42: (3)E10.
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  59. Fritchie KJ, Jin L, Wang X, Graham RP, Torbenson MS, Lewis JE, Rivera M, Garcia JJ, Schembri-Wismayer DJ, Westendorf JJ, Chou MM, Dong J, Oliveira AM. Fusion gene profile of biphenotypic sinonasal sarcoma: an analysis of 44 cases. Histopathology. 2016 Dec; 69 (6):930-936 Epub 2016 Sept 23
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  60. Chang MD, Arthur AK, Garcia JJ, Sukov WR, Shon W. ETV6 rearrangement in a case of mammary analogue secretory carcinoma of the skin. J Cutan Pathol. 2016 Nov; 43 (11):1045-1049 Epub 2016 Sept 09
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  61. Modest MC, Garcia JJ, Arndt CS, Carlson ML. Langerhans cell histiocytosis of the temporal bone: A review of 29 cases at a single center. Laryngoscope. 2016 Aug; 126 (8):1899-904 Epub 2015 Nov 04
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  62. Pusztaszeri MP, Garcia JJ, Faquin WC. Salivary gland FNA: New markers and new opportunities for improved diagnosis. Cancer Cytopathol. 2016 May; 124 (5):307-16 Epub 2015 Nov 05
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  63. Chintakuntlawar AV, Shon W, Erickson-Johnson M, Bilodeau E, Jenkins SM, Davidson JA, Keeney MG, Rivera M, Price DL, Moore EJ, Olsen KD, Kasperbauer JL, Foote RL, Price KA, Garcia JJ. High-grade transformation of acinic cell carcinoma: an inadequately treated entity? Oral Surg Oral Med Oral Pathol Oral Radiol. 2016 May; 121: (5)542-549.e1.
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  64. Funk RK, Moore EJ, Garcia JJ, Harmsen WS, Stoddard DG, Vencio EF, Foote RL, Price KA, Ma DJ. Risk factors for locoregional relapse after transoral robotic surgery for human papillomavirus-related oropharyngeal squamous cell carcinoma. Head Neck. 2016 Apr; 38 Suppl 1:E1674-9 Epub 2015 Dec 15
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  65. Graham RP, Garcia JJ, Greipp PT, Barr Fritcher EG, Kipp BR, Torbenson MS. FGFR1 and FGFR2 in fibrolamellar carcinoma. Histopathology. 2016 Apr; 68(5):686-92. Epub 2015 Oct 05.
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  66. Saade RE, Bell D, Garcia J, Roberts D, Weber R. Role of CRTC1/MAML2 Translocation in the Prognosis and Clinical Outcomes of Mucoepidermoid Carcinoma. JAMA Otolaryngol Head Neck Surg. 2016 Mar; 142 (3):234-40
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  67. Dalvin LA, Thom SB, Garcia JJ, Fadel HJ, Baratz KH. Scleritis Due to Histoplasmosis. Cornea. 2016 Mar; 35: (3)402-4.
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  68. Brobst TD, Garcia JJ, Price KA, Gao G, Smith DI, Price DL. Concurrent Human Papillomavirus-Positive Squamous Cell Carcinoma of the Oropharynx in a Married Couple. Case Rep Otolaryngol. 2016; 2016:8481235 Epub 2016 June 22
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  69. Funk RK, Moore EJ, Garcia JJ, Harmsen WS, Stoddard DG, Vencio EF, Foote RL, Price KA, Ma DJ. Risk factors for locoregional relapse after transoral robotic surgery for human papillomavirus-related oropharyngeal squamous cell carcinoma Cancer Cytopathology.2015;
  70. Chang SY, Keeney M, Law M, Donovan J, Aubry MC, Garcia J. Detection of human papillomavirus in non-small cell carcinoma of the lung. Hum Pathol. 2015 Nov; 46 (11):1592-7 Epub 2015 July 29
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  71. Graham RP, Vierkant RA, Tillmans LS, Wang AH, Laird PW, Weisenberger DJ, Lynch CF, French AJ, Slager SL, Raissian Y, Garcia JJ, Kerr SE, Lee HE, Thibodeau SN, Cerhan JR, Limburg PJ, Smyrk TC. Tumor Budding in Colorectal Carcinoma: Confirmation of Prognostic Significance and Histologic Cutoff in a Population-based Cohort. Am J Surg Pathol. 2015 Oct; 39 (10):1340-6
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  72. Mackenzie R, Kommoss S, Winterhoff BJ, Kipp BR, Garcia JJ, Voss J, Halling K, Karnezis A, Senz J, Yang W, Prigge ES, Reuschenbach M, Doeberitz MV, Gilks BC, Huntsman DG, Bakkum-Gamez J, McAlpine JN, Anglesio MS. Targeted deep sequencing of mucinous ovarian tumors reveals multiple overlapping RAS-pathway activating mutations in borderline and cancerous neoplasms. BMC Cancer. 2015 May 19; 15:415
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  73. Argyris PP, Wehrs RN, Garcia JJ, Koutlas IG. Fluorescence in-situ hybridization identifies Mastermind-like 2 (MAML2) rearrangement in odontogenic cysts with mucous prosoplasia: a pilot study. Histopathology. 2015 May; 66 (6):791-7 Epub 2015 Jan 23
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  74. Stoddard DG Jr, Keeney MG, Gao G, Smith DI, Garcia JJ, O'Brien EK. Transcriptional activity of HPV in inverted papilloma demonstrated by in situ hybridization for E6/E7 mRNA. Otolaryngol Head Neck Surg. 2015 Apr; 152 (4):752-8 Epub 2015 Feb 27
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  75. Garcia JJ, Jin L, Jackson SB, Larsen BT, Lewis JE, Sukov WR, Roden AC. Primary pulmonary hyalinizing clear cell carcinoma of bronchial submucosal gland origin. Hum Pathol. 2015 Mar; 46 (3):471-5 Epub 2014 Nov 26
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  76. Crowson MG, Lalich I, Keeney MG, Garcia JJ, Price DL. Clinicopathologic factors and adjuvant treatment effects on survival in adult head and neck synovial cell sarcoma. Head Neck. 2015 Mar; 37: (3)375-80.
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  77. Capek S, Howe BM, Tracy JA, Garcia JJ, Amrami KK, Spinner RJ. Prostate cancer with perineural spread and dural extension causing bilateral lumbosacral plexopathy: case report. J Neurosurg. 2015 Feb 06; 1-6.
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  78. O'Reilly AG, Powell BD, Garcia JJ, Cofer SA. In vivo durability and safety of rolled acellular dermis in a submucosal pocket in pigs. Cleft Palate Craniofac J. 2015; 52(2):198-202.
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  79. Garcia JJ, Oliveira AM. Fusion transcripts that characterize malignancies of salivary gland origin. Pathology Case Reviews. 2015; 20(1):22-6.
  80. Chung CH, Lee JW, Slebos RJ, Howard JD, Perez J, Kang H, Fertig EJ, Considine M, Gilbert J, Murphy BA, Nallur S, Paranjape T, Jordan RC, Garcia J, Burtness B, Forastiere AA, Weidhaas JB. A 3'-UTR KRAS-variant is associated with cisplatin resistance in patients with recurrent and/or metastatic head and neck squamous cell carcinoma. Ann Oncol. 2014 Nov; 25 (11):2230-2236 Epub 2014 July 31
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  81. Roden AC, Garcia JJ, Wehrs RN, Colby TV, Khoor A, Leslie KO, Chen L. Histopathologic, immunophenotypic and cytogenetic features of pulmonary mucoepidermoid carcinoma. Mod Pathol. 2014 Nov; 27 (11):1479-88 Epub 2014 Apr 18
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  82. Geiger JL, Lazim AF, Walsh FJ, Foote RL, Moore EJ, Okuno SH, Olsen KD, Kasperbauer JL, Price DL, Garces YI, Ma DJ, Neben-Wittich MA, Molina JR, Garcia JJ, Price KA. Adjuvant chemoradiation therapy with high-dose versus weekly cisplatin for resected, locally-advanced HPV/p16-positive and negative head and neck squamous cell carcinoma. Oral Oncol. 2014 Apr; 50 (4):311-8 Epub 2014 Jan 24
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  83. Yoshida EJ, Garcia J, Eisele DW, Chen AM. Salivary gland malignancies in children. Int J Pediatr Otorhinolaryngol. 2014 Feb; 78(2):174-8. Epub 2013 Nov 19.
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  84. Argyris PP, Wehrs RN, Garcia JJ, Koutlas IG. Fluroescence In Situ Hybridization identifies Mastermind-like 2 (MAML2) Rearrangement in Odontogenic Cysts with Mucous Prosoplasia. A Pilot Study. Histopathology. 2014; 65(3).
  85. Geiger JL, Garcia JJ, Price KA. Acinic cell carcinoma of the salivary gland with metastatic spread to the pancreas. Case Rep Oncol. 2014 Jan; 7 (1):195-8 Epub 2014 Mar 13
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  86. Roden AC, Erickson-Johnson MR, Yi ES, Garcia JJ. Analysis of MAML2 rearrangement in mucoepidermoid carcinoma of the thymus. Hum Pathol. 2013 Dec; 44 (12):2799-805 Epub 2013 Oct 14
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  87. Howe BM, Amrami KK, Nathan MA, Garcia JJ, Spinner RJ. Perineural spread of cervical cancer to the sciatic nerve. Skeletal Radiol. 2013 Nov; 42 (11):1627-31 Epub 2013 June 11
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  88. Pulido JS, Flotte TJ, Raja H, Miles S, Winters JL, Niles R, Jaben EA, Markovic SN, Davies J, Kalli KR, Vile RG, Garcia JJ, Salomao DR. Dermal and conjunctival melanocytic proliferations in diffuse uveal melanocytic proliferation. Eye (Lond). 2013 Sep; 27 (9):1058-62 Epub 2013 June 21
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  89. Hallemeier CL, Garces YI, Neben-Wittich MA, Olivier KR, Shon W, Garcia JJ, Brown PD, Foote RL. Adjuvant hypofractionated intensity modulated radiation therapy after resection of regional lymph node metastases in patients with cutaneous malignant melanoma of the head and neck. Pract Radiat Oncol. 2013 Apr-Jun; 3: (2)e71-7.
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  90. Olsen SM, Moore EJ, Laborde RR, Garcia JJ, Janus JR, Price DL, Olsen KD. Transoral surgery alone for human-papillomavirus-associated oropharyngeal squamous cell carcinoma. Ear Nose Throat J. 2013 Feb; 92(2):76-83.
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  91. Anglesio MS, Kommoss S, Tolcher MC, Clarke B, Galletta L, Porter H, Damaraju S, Fereday S, Winterhoff BJ, Kalloger SE, Senz J, Yang W, Steed H, Allo G, Ferguson S, Shaw P, Teoman A, Garcia JJ, Schoolmeester JK, Bakkum-Gamez J, Tinker AV, Bowtell DD, Huntsman DG, Gilks CB, McAlpine JN. Molecular characterization of mucinous ovarian tumours supports a stratified treatment approach with HER2 targeting in 19% of carcinomas. J Pathol. 2013 Jan; 229(1):111-20.
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  92. Laborde RR, Janus JR, Olsen SM, Wang VW, Garcia JJ, Graham RP, Moore EJ, Olsen KD, Kasperbauer JL, Price DL, Berres M, Halling G, Smith DI. Human papillomavirus in oropharyngeal squamous cell carcinoma: assessing virus presence in normal tissue and activity in cervical metastasis. Laryngoscope. 2012 Dec; 122(12):2707-11. Epub 2012 Sep 7
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  93. Carlson ML, Driscoll CL, Garcia JJ, Janus JR, Link MJ. Surgical management of giant transdural glomus jugulare tumors with cerebellar and brainstem compression. J Neurol Surg B Skull Base. 2012 Jun; 73 (3):197-207
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  94. Boland JM, McPhail ED, Garcia JJ, Lewis JE, Schembri-Wismayer DJ. Detection of human papilloma virus and p16 expression in high-grade adenoid cystic carcinoma of the head and neck. Mod Pathol. 2012 Apr; 25 (4):529-36 Epub 2011 Dec 09
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  95. Laborde RR, Wang VW, Smith TM, Olson NE, Olsen SM, Garcia JJ, Olsen KD, Moore EJ, Kasperbauer JL, Tombers NM, Smith DI. Transcriptional profiling by sequencing of oropharyngeal cancer. Mayo Clin Proc. 2012 Mar; 87 (3):226-32
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  96. Moore EJ, Olsen SM, Laborde RR, Garcia JJ, Walsh FJ, Price DL, Janus JR, Kasperbauer JL, Olsen KD. Long-term functional and oncologic results of transoral robotic surgery for oropharyngeal squamous cell carcinoma. Mayo Clin Proc. 2012 Mar; 87 (3):219-25
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  97. Van Abel KM, Moore EJ, Carlson ML, Davidson JA, Garcia JJ, Olsen SM, Olsen KD. Transoral robotic surgery using the thulium:YAG laser: a prospective study. Arch Otolaryngol Head Neck Surg. 2012 Feb; 138(2):158-66.
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  98. Garcia JJ, Wenig BM. Select Neoplasms of the Sinonasal Tract. Surg Pathol Clin. 2011 Dec; 4: (4)1093-125.
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  99. Garcia JJ, Richardson MS. Common Lesions of the Larynx and Hypopharynx. Surg Pathol Clin. 2011 Dec; 4: (4)1153-75.
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  100. Garcia JJ, Hunt JL, Weinreb I, McHugh JB, Barnes EL, Cieply K, Dacic S, Seethala RR. Fluorescence in situ hybridization for detection of MAML2 rearrangements in oncocytic mucoepidermoid carcinomas: utility as a diagnostic test. Hum Pathol. 2011 Dec; 42(12):2001-9. Epub 2011 Jul 20.
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  101. Moura RD, Wang X, Lonzo ML, Erickson-Johnson MR, Garcia JJ, Oliveira AM. Reticular angiomatoid "malignant" fibrous histiocytoma--a case report with cytogenetics and molecular genetic analyses. Hum Pathol. 2011 Sep; 42(9):1359-63. Epub 2011 Mar 15.
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  102. Stelow EB, Shaco-Levy R, Bao F, Garcia J, Klimstra DS. Pancreatic acinar cell carcinomas with prominent ductal differentiation: Mixed acinar ductal carcinoma and mixed acinar endocrine ductal carcinoma. Am J Surg Pathol. 2010 Apr; 34(4):510-8.
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  103. Garcia JJ, Folpe AL. The impact of advances in molecular genetic pathology on the classification, diagnosis and treatment of selected soft tissue tumors of the head and neck. Head Neck Pathol. 2010 Mar; 4 (1):70-6 Epub 2010 Jan 22
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  104. Staats PN, Garcia JJ, Dias-Santagata DC, Kuhlmann G, Stubbs H, McCluggage WG, De Nictolis M, Kommoss F, Soslow RA, Iafrate AJ, Oliva E. Uterine tumors resembling ovarian sex cord tumors (UTROSCT) lack the JAZF1-JJAZ1 translocation frequently seen in endometrial stromal tumors. Am J Surg Pathol. 2009 Aug; 33(8):1206-12.
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  105. Power DG, Shah MA, Asmis TR, Garcia JJ, Kemeny NE. Safety and efficacy of panitumumab following cetuximab: retrospective review of the Memorial Sloan-Kettering experience. Invest New Drugs. 2009 May 26. [Epub ahead of print]
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  106. Garcia J, Riely GJ, Nafa K, Ladanyi M. KRAS mutational testing in the selection of patients for EGFR-targeted therapies. Semin Diagn Pathol. 2008 Nov; 25(4):288-94.
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  107. Garcia JJ, Al-Ahmadie HA, Gopalan A, Tickoo SK, Scardino PT, Reuter VE, Fine SW. Do prostatic transition zone tumors have a distinct morphology? Am J Surg Pathol. 2008 Nov; 32(11):1709-14.
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  108. Yoshida A, Edgar MA, Garcia J, Meyers PA, Morris CD, Panicek DM. Primary desmoplastic small round cell tumor of the femur. Skeletal Radiol. 2008 Sep; 37(9):857-62. Epub 2008 May 10.
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  109. Horvai AE, Kramer MJ, Garcia JJ, O'Donnell RJ. Distribution and prognostic significance of human telomerase reverse transcriptase (hTERT) expression in giant-cell tumor of bone. Mod Pathol. 2008 Apr; 21(4):423-30. Epub 2008 Jan 18.
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  110. Chen AM, Daly ME, El-Sayed I, Garcia J, Lee NY, Bucci MK, Kaplan MJ. Patterns of failure after combined-modality approaches incorporating radiotherapy for sinonasal undifferentiated carcinoma of the head and neck. Int J Radiat Oncol Biol Phys. 2008 Feb 1; 70(2):338-43.
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  111. Chen AM, Garcia J, Granchi PJ, Johnson J, Eisele DW. Late recurrence from salivary gland cancer: when does "cure" mean cure? Cancer. 2008 Jan 15; 112(2):340-4.
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  112. Chen AM, Garcia J, Bucci MK, Chan AS, Kaplan MJ, Singer MI, Phillips TL. Recurrent salivary gland carcinomas treated by surgery with or without intraoperative radiation therapy. Head Neck. 2008 Jan; 30(1):2-9.
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  113. Chen AM, Grekin RC, Garcia J, Bucci MK, Margolis LW. Radiation therapy for cutaneous squamous cell carcinoma involving the parotid area lymph nodes: dose and volume considerations. Int J Radiat Oncol Biol Phys. 2007 Dec 1; 69(5):1377-80. Epub 2007 Aug 08.
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  114. Chen AM, Daly ME, Bucci MK, Xia P, Akazawa C, Quivey JM, Weinberg V, Garcia J, Lee NY, Kaplan MJ, El-Sayed I, Eisele DW, Fu KK, Phillips TL. Carcinomas of the paranasal sinuses and nasal cavity treated with radiotherapy at a single institution over five decades: are we making improvement? Int J Radiat Oncol Biol Phys. 2007 Sep 1; 69(1):141-7. Epub 2007 Apr 24.
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  115. Chen AM, Jahan TM, Jablons DM, Garcia J, Larson DA. Risk of cerebral metastases and neurological death after pathological complete response to neoadjuvant therapy for locally advanced nonsmall-cell lung cancer: clinical implications for the subsequent management of the brain. Cancer. 2007 Apr 15; 109(8):1668-75.
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  116. Chen AM, Granchi PJ, Garcia J, Bucci MK, Fu KK, Eisele DW. Local-regional recurrence after surgery without postoperative irradiation for carcinomas of the major salivary glands: implications for adjuvant therapy. Int J Radiat Oncol Biol Phys. 2007 Mar 15; 67(4):982-7. Epub 2007 Jan 22.
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  117. Chen AM, Garcia J, Lee NY, Bucci MK, Eisele DW. Patterns of nodal relapse after surgery and postoperative radiation therapy for carcinomas of the major and minor salivary glands: what is the role of elective neck irradiation? Int J Radiat Oncol Biol Phys. 2007 Mar 15; 67(4):988-94. Epub 2007 Jan 17.
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  118. Chen AM, Bucci MK, Singer MI, Garcia J, Kaplan MJ, Chan AS, Phillips TL. Intraoperative radiation therapy for recurrent head-and-neck cancer: the UCSF experience. Int J Radiat Oncol Biol Phys. 2007 Jan 1; 67(1):122-9. Epub 2006 Nov 02.
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  119. Chen AM, Garcia J, Bucci MK, Quivey JM, Eisele DW. The role of postoperative radiation therapy in carcinoma ex pleomorphic adenoma of the parotid gland. Int J Radiat Oncol Biol Phys. 2007 Jan 1; 67(1):138-43. Epub 2006 Oct 16.
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  120. Chen AM, Garcia J, Bucci MK, Quivey JM, Eisele DW. Recurrent pleomorphic adenoma of the parotid gland: long-term outcome of patients treated with radiation therapy. Int J Radiat Oncol Biol Phys. 2006 Nov 15; 66(4):1031-5.
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  121. Chen AM, Bucci MK, Quivey JM, Garcia J, Eisele DW, Fu KK. Long-term outcome of patients treated by radiation therapy alone for salivary gland carcinomas. Int J Radiat Oncol Biol Phys. 2006 Nov 15; 66(4):1044-50. Epub 2006 Sep 11.
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  122. Chen AM, Bucci MK, Weinberg V, Garcia J, Quivey JM, Schechter NR, Phillips TL, Fu KK, Eisele DW. Adenoid cystic carcinoma of the head and neck treated by surgery with or without postoperative radiation therapy: prognostic features of recurrence. Int J Radiat Oncol Biol Phys. 2006 Sep 1; 66(1):152-9.
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  123. Garcia JJ, Kramer MJ, O'Donnell RJ, Horvai AE. Mismatch repair protein expression and microsatellite instability: a comparison of clear cell sarcoma of soft parts and metastatic melanoma. Mod Pathol. 2006 Jul; 19(7):950-7. Epub 2006 Apr 14.
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  124. Garcia JJ, Kramer MJ, Mackey ZB, O'Donnell RJ, Horvai AE. Utility of CD117 immunoreactivity in differentiating metastatic melanoma from clear cell sarcoma. Arch Pathol Lab Med. 2006 Mar; 130(3):343-8.
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  125. Tallman MS, Perez WS, Lazarus HM, Gale RP, Maziarz RT, Rowe JM, Marks DI, Cahn JY, Bashey A, Bishop MR, Christiansen N, Frankel SR, Garcia JJ, Ilhan O, Laughlin MJ, Liesveld J, Linker C, Litzow MR, Luger S, McCarthy PL, Milone GA, Pavlovsky S, Phillips GL, Russell JA, Saez RA, Schiller G, Sierra J, Weiner RS, Zander AR, Zhang MJ, Keating A, Weisdorf DJ, Horowitz MM. Pretransplantation consolidation chemotherapy decreases leukemia relapse after autologous blood and bone marrow transplants for acute myelogenous leukemia in first remission. Biol Blood Marrow Transplant. 2006 Feb; 12(2):204-16.
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  126. Jun P, Garcia J, Tihan T, McDermott MW, Cha S. Perfusion MR imaging of an intracranial collision tumor confirmed by image-guided biopsy. AJNR Am J Neuroradiol. 2006 Jan; 27(1):94-7.
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  127. Kakar S, Burgart LJ, Batts KP, Garcia J, Jain D, Ferrell LD. Clinicopathologic features and survival in fibrolamellar carcinoma: comparison with conventional hepatocellular carcinoma with and without cirrhosis. Mod Pathol. 2005 Nov; 18(11):1417-23.
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  128. Azar RJ, Jablons D, Garcia J. Needle tract seeding after percutaneous biopsy of a suspected hepatic adenoma. Surg Rounds. 2004 Dec; 585-8.
  129. Martinez CV, Old MO, Kwock DK, Khan SS, Garcia JJ, Chan CS, Webster R, Falkovitz-Halpern MS, Maldonado YA. Shedding of sabin poliovirus Type 3 containing the nucleotide 472 uracil-to-cytosine point mutation after administration of oral poliovirus vaccine. J Infect Dis. 2004 Jul 15; 190(2):409-16. Epub 2004 Jun 18.
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  130. Old MO, Martinez CV, Kwock D, Garcia J, Martin G, Chan C, Maldonado YA. Direct extraction of Sabin poliovirus genomes from human fecal samples using a guanidine thiocyanate extraction method. J Virol Methods. 2003 Jun 30; 110(2):193-200.
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